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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs76799241 chr4:109504736 A/C 0.000116 473 16.8 14.47 15.17 KM Plot
THCA rs76817219 chr3:38041346 G/A 4.23E-5 470 16.37 14.9 10.57 KM Plot
THCA rs7682218 chr4:155772543 G/T 9.18E-5 490 16.3 15.17 14.9 KM Plot
THCA rs76826153 chr5:81292311 G/A 8.87E-5 486 15.9 16.3 17.97 KM Plot
THCA rs7685686 chr4:3207142 A/G 0.000142 483 17 14.47 14.93 KM Plot
THCA rs76888871 chr6:24433089 G/A 6.2E-7 479 16.33 14.9 9.25 KM Plot
THCA rs76889591 chr1:181552334 T/G 1.44E-6 484 15.63 18.4 17.77 KM Plot
THCA rs76892505 chr10:104719290 G/A 7.06E-9 487 15.23 17.63 32.1 KM Plot
THCA rs76910548 chr1:219551625 G/C 3.2E-7 490 15.87 17.23 7.93 KM Plot
THCA rs76925785 chr19:58229163 G/A 3.5E-5 480 15.17 17.13 15.13 KM Plot
THCA rs76946169 chr2:48046807 A/G 1.2E-7 486 15.27 17.93 8.27 KM Plot
THCA rs76957852 chr14:59675634 T/C 0 488 15.9 16.4 3.53 KM Plot
THCA rs76976894 chr6:24424580 A/G 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs76986060 chr1:219527475 A/G 3.79E-7 484 15.9 16.93 7.93 KM Plot
THCA rs7698794 chr4:110759146 G/C 6.11E-5 490 15.9 16.02 15.3 KM Plot